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Teaching and Learning with NWB Datasets
INTRODUCTION
Introduction
How to Use this Book
Set up Coding Environment
For Educators
Data Science in Python
NumPy
Pandas
Matplotlib
SciPy
PYNWB
Lesson #1: The Structure of NWB Datasets
Obtaining Datasets with DANDI
Working with NWB in Python
Interactive NWB Data Exploration
Lesson #1 Problem Set
Lesson #2: Analyzing Extracellular Recordings
Spike Sorting
Visualizing Large Scale Recordings
Lesson #2 Problem Set
ALLENSDK
Lesson #3: Single-Cell Electrophysiology
Obtaining Data for Single Cells
Analyzing Computed Features
Lesson 3 Problem Set
Lesson #4: Two Photon Imaging
Retrieving Calcium Imaging Data
Analyzing Two Photon Data
Correlations in Two Photon Data
GREATEST HITS
Greatest Hits in Physiology
How does the brain encode space?
How do populations of neurons encode movement?
Index
